I have developed a process in which I am using a Run Query activity.
But when I run the workflow in Debug mode, the activity gets skipped.
Even after applying a breakpoint, the bot does not stop at that step.
Have you filled out the output for Datatable on the Run Query activity?
If you are inspecting the datatable for data, which is not there, then perhaps not defining this output could be the cause.
Queries can be quick to run, so not seing data could perhaps give the assumption that the activity is being skipped.